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Welcome to the Matrix

Each cell in the matrix shows the number of correspondences (and maps) between each pair. A correspondence is any relationship between two features.

Restrict Reference Sets By:         Use Colors Hide Empty Rows
Reference Set Bin Genetic Reference Reference Set
AD:Gh/Gb AD:Gb/Gh AD:Gh/Gb AD:Gh/Gh AD:Gh/Gto A:Gar/Gar A:Gar/Ghe A:Ghe/Gar D:Gtr/Gra G:Gne/Gau AD:Ref_Map
  Monsanto SSR Bin Map 3-79 x NM-24016, RIL (2008) Hai-7124 x Junmian-1, BC1 (2008) Hai-7124 x Junmian-1, F2 (2008) Pima S-7 x Empire, F2 (2007) Pima S-7 x im, F2 (2007) Pima S-7 x n2, F2 (2007) Acala-44 x Pima S-7, F2 (2004) CCRI-36 x Hai-7124 ,F2 (2007) CAMD-E x Seaberry, F2 (1998) Deltapine x Giza-83, F2 (2008) Deltapine-61 x Seaberry, F2 (2000) Emian-22 x 3-79, BC1 (2008) Guazuncho-2 x VH8-4602, BC1 (2005) Guazuncho-2 x VH8-4602, BC2 (2006) Handan-208 x Pima-90, F2 (2007) Palmeri x K-101, F2 (2007) Sic'on x F-177, F2 (2004) TM-1 x 3-79, RIL (2006) TM-1 x Hai-7124, BC1 (2007) Tamcot-2111 x Pima S-6, BC3F2 (2005) Vgs x (TM-1 x Hai-7124), DH (2002) Vgs x (TM-1 x Hai-7124), DH (2005) Xinluzao-1 x Hai-7124, F2 (2008) 7235 x TM-1, RIL (2007) DES 119-5 x MD51ne, F2,3 (2002) Deltapine-61 x Texas-701, F2 (2007) HQ95-6 x MD51ne, F2,3 (2002) HS-46 x MARCABUCAG8US-1-88, F2,3 (1998) MD-5678ne x Prema, F2,3 (2000) (Simian-3 x Sumian-12) x (Zhong-4133 x 8891), 4WC (2008) Yumian-1 x T586, F2:3 (2005) Zhongmiansuo-12 x 8891, RIL (2007) TM-1 x WT-936, F2 (2005) Jiang-Ling-Zhong-Mian x Zhe-Jiang-Xiao-Shan-Lu-Shu, F2 SMA-4 x A1-97, F2 (2005) A1-97 x A2-47, F2 (1999) Gt x Gr, F2 (2004) Gos-5024 x Hyb 601-2, F2-a (2003) Gos-5024 x Hyb 601-2, F2-n (2003) Ref_map  
Genetic AD:Gh/Gb
TM-1 x Hai-7124, BC1 (2007) 		TH-BC1_chr01 - 1(1) 1(1) - - - - 2(2) 6(2) - - - 13(4) 9(4) 4(2) 7(3) 5(4) - 1(1) 20(7) 5(4) - 16(5) 6(2) 2(1) - 3(2) - - - - - 1(1) - 4(2) - - - - - - TH-BC1_chr01 AD:Gh/Gb
TM-1 x Hai-7124, BC1 (2007) 		Genetic
TH-BC1_chr02 - 3(1) - - - - - 1(1) 9(2) - - - 4(1) 6(2) 4(3) 7(3) 1(1) - 2(1) 9(4) 1(1) - 11(4) 4(1) 2(1) - - - - - 2(1) - - - 2(1) - - - - - - TH-BC1_chr02
TH-BC1_chr03 - 1(1) - - - - - - 13(3) - - - 5(2) 12(3) 7(3) 7(4) 2(2) - 7(1) 10(3) 2(2) - 16(3) 6(5) 3(1) - - - - - - 2(1) 5(3) - 3(2) - - - - - - TH-BC1_chr03
TH-BC1_chr04 - 1(1) 3(1) - - - - 1(1) 8(3) - - - 6(2) 8(3) 4(2) 3(2) 2(2) - 1(1) 10(4) 2(2) - 7(3) 2(1) - - - - - - 2(2) - 1(1) - 1(1) - - - - - - TH-BC1_chr04
TH-BC1_chr05 - 1(1) 37(3) 33(1) - - - - 17(4) - - - 15(4) 25(7) 6(3) 16(4) 3(2) - 10(5) 24(4) 3(2) - 18(6) 8(5) 6(5) - - 1(1) - - 13(5) 1(1) 10(4) - 1(1) - - - - - - TH-BC1_chr05
TH-BC1_chr06 - 2(1) - - - - - 1(1) 16(2) - 5(1) - 10(3) 21(9) 6(2) 12(4) 3(3) - 6(4) 21(6) 3(3) - 15(4) 6(2) 3(2) - 2(2) - - - 14(2) 3(2) 3(1) - 9(4) - - - - - - TH-BC1_chr06
TH-BC1_chr07 - - 19(2) 1(1) - - - - 7(1) - - - 2(2) 10(5) 2(2) 8(3) 1(1) - 2(2) 14(5) 1(1) - 8(3) 4(3) 3(3) - 2(2) - - - 1(1) 1(1) 2(2) - 3(1) 1(1) - - - - - TH-BC1_chr07
TH-BC1_chr08 - 2(2) 17(1) 14(1) - - - 1(1) 13(2) - 2(2) - 8(1) 20(8) 1(1) 8(3) 4(1) - 5(1) 20(4) 4(1) - 7(3) 5(4) 5(2) - - - - - 3(1) 2(1) 2(2) - 2(1) - - - - - - TH-BC1_chr08
TH-BC1_chr09 - - 12(1) - - - - 1(1) 25(2) - 2(1) - 15(4) 22(2) 11(2) 19(3) 10(2) - 6(2) 13(2) 10(2) - 34(6) 16(5) 7(2) - 2(2) - - - 6(1) 1(1) 8(3) - 6(2) - - - - - - TH-BC1_chr09
TH-BC1_chr10 - 4(2) - - - - - 2(2) 14(2) - 3(2) - 9(2) 15(8) 4(2) 8(2) 3(1) - 7(2) 17(9) 3(1) - 19(5) 5(1) - - - - - - 4(1) 3(3) 1(1) - 1(1) - - - - - - TH-BC1_chr10
TH-BC1_chr11 - - 1(1) - - - - 1(1) 23(2) - - - 22(4) 23(2) 9(2) 28(8) 13(4) - 12(3) 19(4) 13(4) - 44(7) 17(3) 4(2) - 3(2) - - - 9(4) 4(3) 5(3) - 13(2) - - - - - - TH-BC1_chr11
TH-BC1_chr12 - 2(1) - - - - - 4(3) 14(2) - - - 11(3) 18(6) 6(2) 8(3) 3(2) - 3(3) 14(5) 3(3) - 25(5) 8(3) 3(3) - 1(1) - - - 6(2) 1(1) 2(1) - 8(2) - - - - - - TH-BC1_chr12
TH-BC1_chr13 - - - - - - - 2(2) 18(4) - - - 12(6) 23(8) 5(4) 20(5) 6(2) - 4(1) 13(4) 6(2) - 21(5) 8(4) 2(2) - 3(1) - - - - 3(2) 1(1) - 3(1) - - - - - - TH-BC1_chr13
TH-BC1_chr14 - 1(1) - - - - - 3(1) 8(3) - - - 7(2) 9(3) - 13(3) 3(1) - 3(2) 7(5) 3(1) - 20(7) 3(1) 5(4) - - - - - 6(2) - 4(4) - 2(1) - - - - - - TH-BC1_chr14
TH-BC1_chr15 - 4(2) - - - - - 4(1) 14(3) - - - 16(4) 12(2) 5(2) 18(5) 6(5) - 4(1) 11(2) 6(5) - 17(5) 12(2) 3(1) - 3(2) - - - - 3(2) 1(1) - 5(1) - - - - - - TH-BC1_chr15
TH-BC1_chr16 - - 10(1) - - - - 1(1) 9(3) - - - 7(2) 11(4) 3(2) 14(2) 2(1) - 2(1) 14(5) 2(1) - 16(3) 8(2) 5(2) - 3(2) - - - - 3(1) 3(2) - 4(1) - - - - - - TH-BC1_chr16
TH-BC1_chr17 - 6(2) - - - - - 2(1) 11(3) - 2(1) - 11(6) 7(4) 6(2) 11(3) 3(3) - 2(2) 14(4) 3(3) - 16(4) 6(2) 3(1) - - - - - 4(1) - - - 4(3) - - - - - - TH-BC1_chr17
TH-BC1_chr18 - - 1(1) - - - - 4(1) 14(2) - - - 15(6) 20(6) 7(3) 25(4) 10(2) - 5(2) 18(7) 10(2) - 22(6) 9(3) 1(1) - - - - - 7(3) 1(1) 2(2) - 1(1) - - - - - - TH-BC1_chr18
TH-BC1_chr19 - - 20(2) 4(1) - - - 2(1) 23(4) - - - 19(2) 28(5) 9(2) 40(9) 8(3) - 4(3) 22(8) 8(3) - 25(6) 13(1) 7(3) - 6(3) - - - 12(4) 1(1) 4(3) - 7(2) - - - - - - TH-BC1_chr19
TH-BC1_chr20 - 1(1) 2(2) 1(1) - - - 3(2) 9(5) - - - 10(4) 14(5) 6(2) 11(2) 3(3) - 6(4) 20(9) 3(3) - 26(11) 3(1) 1(1) - - - - - 3(2) 1(1) 4(3) - 6(3) - - - - - - TH-BC1_chr20
TH-BC1_chr21 - - 12(1) - - - - 1(1) 14(3) - 4(1) - 17(4) 17(2) 4(2) 30(10) 5(5) - 6(3) 19(4) 5(5) - 39(4) 10(2) 5(4) - 6(1) - - - 6(3) 5(4) 1(1) - 10(1) - - - - - - TH-BC1_chr21
TH-BC1_chr22 - - 13(2) 3(1) - - - - 9(6) - 6(2) - 9(5) 12(6) 8(4) 14(5) 3(2) - 6(2) 19(7) 3(2) - 26(8) 11(8) 4(3) - - - - - 5(3) - 6(3) - 1(1) - - - - - - TH-BC1_chr22
TH-BC1_chr23 - - 4(1) - - - - - 15(2) - 1(1) - 12(3) 18(2) 9(2) 15(3) 3(2) - 5(2) 16(5) 3(2) - 24(5) 16(3) 8(4) - 4(2) - - - 12(2) 1(1) 12(3) - - - - - - - - TH-BC1_chr23
TH-BC1_chr24 - - 6(1) 2(1) - - - - 18(2) - - - 17(2) 16(2) 3(2) 24(4) 1(1) - 2(1) 19(4) 1(1) - 23(5) 10(2) 15(3) - 2(1) - - - 5(1) 3(2) 3(2) - 2(1) - - - - - - TH-BC1_chr24
TH-BC1_chr25 - 1(1) - - - - - 3(1) 17(2) - 7(2) - 19(1) 21(5) 11(3) 31(7) 6(4) - 6(2) 20(5) 6(4) - 21(3) 12(2) 6(2) - 3(3) - - - - 1(1) 7(1) - 10(4) - - - - - - TH-BC1_chr25
TH-BC1_chr26 - 6(1) - - - - - 6(2) 14(2) - - - 14(4) 21(5) 4(2) 20(4) 5(2) - 8(3) 13(4) 5(2) - 14(7) 9(4) - - - - - - 4(1) 1(1) 4(3) - 2(1) - - - - - - TH-BC1_chr26
  Monsanto SSR Bin Map 3-79 x NM-24016, RIL (2008) Hai-7124 x Junmian-1, BC1 (2008) Hai-7124 x Junmian-1, F2 (2008) Pima S-7 x Empire, F2 (2007) Pima S-7 x im, F2 (2007) Pima S-7 x n2, F2 (2007) Acala-44 x Pima S-7, F2 (2004) CCRI-36 x Hai-7124 ,F2 (2007) CAMD-E x Seaberry, F2 (1998) Deltapine x Giza-83, F2 (2008) Deltapine-61 x Seaberry, F2 (2000) Emian-22 x 3-79, BC1 (2008) Guazuncho-2 x VH8-4602, BC1 (2005) Guazuncho-2 x VH8-4602, BC2 (2006) Handan-208 x Pima-90, F2 (2007) Palmeri x K-101, F2 (2007) Sic'on x F-177, F2 (2004) TM-1 x 3-79, RIL (2006) TM-1 x Hai-7124, BC1 (2007) Tamcot-2111 x Pima S-6, BC3F2 (2005) Vgs x (TM-1 x Hai-7124), DH (2002) Vgs x (TM-1 x Hai-7124), DH (2005) Xinluzao-1 x Hai-7124, F2 (2008) 7235 x TM-1, RIL (2007) DES 119-5 x MD51ne, F2,3 (2002) Deltapine-61 x Texas-701, F2 (2007) HQ95-6 x MD51ne, F2,3 (2002) HS-46 x MARCABUCAG8US-1-88, F2,3 (1998) MD-5678ne x Prema, F2,3 (2000) (Simian-3 x Sumian-12) x (Zhong-4133 x 8891), 4WC (2008) Yumian-1 x T586, F2:3 (2005) Zhongmiansuo-12 x 8891, RIL (2007) TM-1 x WT-936, F2 (2005) Jiang-Ling-Zhong-Mian x Zhe-Jiang-Xiao-Shan-Lu-Shu, F2 SMA-4 x A1-97, F2 (2005) A1-97 x A2-47, F2 (1999) Gt x Gr, F2 (2004) Gos-5024 x Hyb 601-2, F2-a (2003) Gos-5024 x Hyb 601-2, F2-n (2003) Ref_map  
Legend: Correspondences (Corresponding Maps)
Wed Jul 12, 2006
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