Databases available for BLAST search
Nucleotide Sequence Databases
- new Gossypium nucleotide sequences (all) (2008-05-07)
- cotton nucleotide sequences (all kinds), of GenBank,
TIGR,
and PlantGDB.
- new
Gossypium unigene sequences (all) (2008-02-25)
- A combination of GenBank UniGenes, TIGR Cotton Gene Index, and PlantGDB Gossypium EST assmbly.
-
Gossypium SSR sequences (all) (2008-02-25)
- cotton Simple Sequence Sepeats/microsatellite sequences, of stored in CottonDB, which includes sequences either or
not have submitted to GenBank.
- Gossypium nucleotide sequences (genbank) (2008-02-25)
- cotton nucleotide sequences (all kinds), of GenBank
-
Gossypium core nucleotide sequences (genbank) (2008-02-25)
- cotton CoreNucleotide sequences (nucleotide records that are not in the
other subsets), of GenBank
-
Gossypium EST sequences (genbank) (2008-02-25)
- cotton Expressed Sequence Tag records, of GenBank
- Gossypium GSS sequence (genbank) (2008-02-25)
- cotton Genome Survey Sequence, of GenBank
-
A. thaliana EST contigs (plantgdb) (2008-02-25)
- Arabidopsis thaliana compressed putative unique transcript sequences, of
PlantGDB EST Assembly Project version
163a. (For more information about the assembly, click
HERE).
-
Arabidopsis Gene Indices (tigr) (2008-02-25)
- Arabidopsis Gene Index sequence data from The Gene Index
Project Release 13.0. (For Terminology & Explanations details, click HERE)
- new
G. hirsutum UniGene sequences (genbank) (2008-02-25)
- Gossypium hirsutum UniGene sequences, of GenBank
- new
G. raimondii UniGene sequences (genbank) (2008-02-25)
- Gossypium raimondii UniGene sequences, of GenBank
-
Gossypium EST contigs (plantgdb) (2008-02-25)
- Gossypium (G.arboreum, G.hirsutum and G.raimondii) compressed putative
unique transcript sequences, of PlantGDB EST Assembly Project version
157a. (For more information about the assembly, click HERE).
-
G. arboreum EST contigs (plantgdb) (2008-02-25)
- Gossypium arboreum compressed putative unique transcript sequences, of PlantGDB EST Assembly Project version
157a. (For more information about the assembly, click
HERE).
-
G. hirsutum EST contigs (plantgdb) (2008-02-25)
- Gossypium hirsutum compressed putative unique transcript sequences, of PlantGDB Assembly Project version
157a. (For more information about the assembly, click
HERE).
-
G. raimondii EST contigs (plantgdb) (2008-02-25)
- Gossypium raimondii compressed putative unique transcript sequences, of PlantGDB EST Assembly Project version
157a. (For more information about the assembly, click
HERE).
-
Cotton Gene Indices (tigr) (2008-02-25)
- Cotton Gene Index sequence data from The Gene Index
Project Release 8.0 (For Terminology & Explanations details, click HERE).
Peptide Sequence Databases
- new Gossypium protein sequences (all) (2008-02-25)
- All cotton proteins, of GenBank and UniProt
- Gossypium protein sequences (genbank) (2008-02-25)
- cotton proteins, of GenBank
- Gossypium protein sequences (sp/trembl) (2008-02-25)
- cotton proteins, of UniProt